CDS
| Accession Number | TCMCG007C05721 |
| gbkey | CDS |
| Protein Id | XP_009130801.1 |
| Location | complement(join(4590321..4590485,4590588..4590744,4590969..4591039,4591160..4591311,4591407..4591647,4591722..4591781,4591866..4591953,4597601..4597731,4597830..4597976,4598086..4598136,4598211..4598285,4598382..4598489,4598599..4598646,4598729..4598890,4598969..4599069,4599158..4599305,4599390..4599551,4599654..4599771,4599861..4599985,4600119..4600358,4600452..4600592,4600714..4600869,4600961..4601209,4601300..4601544,4601622..4601735,4601870..4602153,4602287..4602368,4602469..4602606,4602706..4602823,4602924..4603226,4603317..4603515,4603603..4604078,4604166..4604272,4604362..4604440,4604529..4604684)) |
| Gene | LOC103855553 |
| GeneID | 103855553 |
| Organism | Brassica rapa |
Protein
| Length | 1798aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009132553.3 |
| Definition | uncharacterized protein LOC103855553 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | tRNA rRNA methyltransferase (SpoU) family protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15333
[VIEW IN KEGG] |
| EC |
2.1.1.34
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAGTTCCTCTCTGATTACTTCACTGTCGCTGAGCTTCAAACAAGTTCCTCCAACAGCTGTTCCCGCTTTTCTCGACTGTGTCCTAAGCTCCACAGGCGTGTCTCCCTCCTCCCTCTTCGAATCCCTCATCAAAGAGTTGCCTTTTCACGCGGAGGAGAAGAAGTTCGATTCTGATGATTGCAACCACATTGCTTCGTTGGTGGCTGGTCTTTGTCACCTACTAAAGAGTTCTGGGTTTGGTAATGAGGATAATCATAATGCGTTGCAGTTGTTTGTGTGGAGAGTGTTTATTCCACTTATGAAGATGGTTCGTGCTTATGACTTGGATGTGCTTAATAAGATAATACAATCGTTCTTTGATGTTGTGGTCGAGACTAGTGCATTGGATATATTGAGAGTGAGTTTGGTGCCTTTTCTACTGAGATCAGTTGGGGTTTCGATGGGAATGCTTCAACATGAAGAATCGGATTTCATCAGGTGGGGAGAGCTGTTGCTTGGTGGCTCTTTGGATATAAATGATAAGGATGAAAACTACGTTGGATCTTTGTCTGAGTCATTTCCGATTCCACTGTCGTGCCATCTTTTGAATCTGATACTGAACGCTGCTTTTCGAAGTCGCCAAGAAGCTCCAGAGGCTGAGGATTTTGCAGCTGGTTTGCTTTGGGATTTGTGTAATACTACTGAGAGGCTTTTGTCTCAAAGTGTGGAGCATCGTTCGTGTGCTGTTAGTTTCCTCCTCCCTGCTGTTTTCAAGGCGTTTTCAGCTCAGTCTTCTCTGAAGATTTCACTTAAAGGGAATGTGTACATACTTTCAAGGAATGGCTTCAAGAAAAGGATTTGGGAATGCTGCAAGAAGCTGTTCTCGGTTGGATCAATAGAGAGAAGGGATGCTTACAGTGTTCTCTCTTTGTGTCTTTCTTCTAACGGAGCCCTAAGTTATGTCTCAGAAAAAGACCCTGTCGAATTTGACTTTAGGTCTGATCAAGAGTTTTGGGAAGAAATCAAGAAAGGCTTGGTTTTTGATGAGAGCTTAGTAAGGAAGCAGTCATTGCATATACTGAAATCAGTTTTATCCATAAGCGAAGTGAGTAAGACGAGTACTGACAAGAAGGCAGAAGGGAACTCAGTTCACCGTGCTTTGACGAAAAAGGAGATGTGGGCAGAAAAGGAAGCCAAGTCACTTGGTGTGGGAGAATTGTATGGCTCTGTTGAATCTGCTTTGACTAGTCAGCAGCAGCAGTGGCAAGCTTTTGTGCTCCTGTATGAGATGCTTGACGAGTACGGCACTCATCTCGTAGAAGCAGTGTGGAGTAACCAGATTGATTTGTTAATCAAATCATCGTTCAGATATGAAGAAACTCCAGATGAGGAAACTGAAATATTTAATTGGCTAGAGGTTCTTTGGAATCGAGGCTTTCGTCATGATAATCCTCTAGTCAGGTGCACGGTCATGGAGTCTTTTATGGGGATTGAGTGGAGAAGATACAAAACATGTACACAATCAATGTCCCAAACTTTCGTTCTTGGGCCTTTCATAGAGGCTTTGAATGATTCTGTACACCACAAGGACTTCGGGCTGAAAAGAATCTATACCTCAAGAACAATTGAAGGTGCAGCTCAATATGTGTGTGCGTACACAAGTTGCCTCAACCCAAGGAATCGGATTGGATTTTTGATCAACTTGGCATCTCTTGCAAAGAAACAGTCTTTTGGTAGGGCTGGATTTATGGCTTTGGTACAATGCATTGTTTCTACAGCATATGTGGTTGGAGGATACGGGAACAAGGAGATGGAGCATCTTGAAAATGGATTCTCTGGGACTCCTCTAGAACCTTCTAGTGAACATTTAAGCCAAGATGAGATGTCACATATACTGGATGTCTTGAAGTTTGTTGCAGAGAGCAGCAGACAACATTTTAATCACAAATACCGTACTCGAGTTTGCCAAAAAGTGTTGGAAACTGCTGCTTCAGTGGTGAACCCTTGTGAAGTTCCTCTTGGAACACTATTGCAGTTTGTTTCAGCAATTCCTCGGGAGTTTACTGACCATAATGGTTCATTGCGGAAAACGATGCTAGAATGGCTCCAGGGGTGCAACAGAAACACTTCCGACAGTTTATGTACTGATGGCACTCGTCTTGTATCGAGCCTTCACGAGTATCTGAAAGAATTTGTCAGTGATCATGTTGAGGGTTTTGATGATGAAGACTTGGAAGCATGGGAATCCCAAACAAAACGATGGGCAAGAGTATTTTTCCTTACAGTTAATGATGAAGAACATCTCGCCGATATCATAATGTTTGTGCAAAATAGCGGCGTTAGTTTTTTCCAAGAGAAGAACCATTTAGAACGAGCACCTGCGAAGTTTTTAATCTTTATTTTGAGTATGCTCTTAGAGCTCCAGAACATGCAAGATGGAGTCTCTGAACTTAGTTCTTCGGTGAAAAGCAAGTCATGCATTGGCATTGTTGAGGAAACTGGCAAGCAGATCGTTGGTAGTGCTTCAGTTATTAATGAAAAGTTTGCTGCTGTTCTCTTATCGATACTGAAGCAGCTGGTTTCATTTGCTGATTCATCTTGCTCAATATTCTGGTCTCACACTACAGTGGAGAATGGTGTTCTGTCTGGTTCTATCACAGGAAAACTAGGGGGTCCAAGTCAACGCCGGCTATCTGTTCCTACTACAACAGCTGTACTAGAAGCTGTAACATCGGTGAAAATTATTGGGTTGATCTCGTCATACTGTGGTCAAGTAACTAGTGGTGTTACTGAACTCAAATTAGCATTGACTTTCTTTTGGAAGTTCGTCCAGCATACGTTATCATCTCAAAATTGTAATTCTGAGGCTGAAGCTGAGATCTATCTTGCAGCATTTGAAACGCTAGCTGCTGTACTGAATGCAGTTGTGTCCTTGTGCTCAGCTAGAGCTTTCAACCTTCTAGAAAACGATAATACATTATTAGCCACGGTGGATGGTGAATATTGGTTACAAGCTTCAGTTCCGGATTTCCTCCACAACATTAACCATCTTCTCACAGCAGGACTTCTGGCAAGAAGTAGAAGGGCTGTTCTGCTTAGCTGGAAGTGGCTTTGTGTGGAGTCTCTATTATCAGTCATGAATGTTCTTGATGCCAGACGTATTCCAGGAGATAGGACGTCTTTCTTCTCAGATGATACAGTCAAAAGCATATTTTATGATATTGTAGAGAGCCTTGAAAATGCTGGGGAGGGTTCTGCTTTGCCTATGCTGAAATCTGTCAGACTTGCTTTGGGGATACTTGCGTCTGGGAAATCATCTTTGGATGGTTTCTCGGGTGTGGATACTCAGACGATGTGGCAGCTGGTCAAATCATGTTGGATATTGCATATCAGCTGCAAGAAGAGAAGGGTCGCACCCATCGCTGCGCTTTTGTCTTCTGTGCTGCATTCTTCTTTGTTTAGTAATAAAGACATGCACGTAGCTGAAGATGGAGATGGACCGCTGAAGTGGTTTGTTGAAAAAGTACTTGAGGAAGGTCAGAAAAGTCCACGCACAATTCGACTTGCGGCCTTGCACCTAACAGGACTGTGGCTCATGTACCCTAGGACGATCAAGTACTACATTAAAGAATTGAAGCTTCTGACTCTCTATGGTTCTGTTGCATTTGATGAGGATTTTGAAGCTGAGTTATCTGACAATAGTGATGCAAGAACTGAAGTATCGTTACTGGCAAAGAACCCAGACCCTGAACTGACAGAAGTTTTTATCAACACGGAGTTGTATGCACGTGTGTCAGTCGCTGGTCTGTTTCAGAAGCTGGCTGATTTGGCCAATATGGCCGAACCAGCATGTCAAAATCAAGATTACCAGGATGCTATTGTGGCTGGAAAGTTGTTTCTATTGGAGCTTCTTGATGCAGCGGTGCATGATAAAGACTTGGCAAAAGAGCTTTACAAGAAGTATAGTGCTATCCATAGACGAAAAATACGCGCGTGGCAGATGATATGCATTATGTCGCGCTTTGTCAGCAATGACATTGTTGGCCAAGTCATGGACAATGTGCACATTTGCTTATATAGAAATAACCTGCCTGCTGTTCGACAATACCTGGAAACATTTGCCATAAACATTTACCTGAAGTTTCCACCATTGGTTAAAGAGCAGTTAGTTCCTATACTGCAAAATTACGACACTAAAGCTCAGCAAGCTCTCTCGTCCTATGTCTTCATTGCAGCCAATGTCATCCTTCATGCCGAAAAGATGGCTCAACAGACAAATTTGAGAGAACTTCTTCCACCAATAATTCCGTTGTTAACTTCTCATCATCACAGCTTACGAGGTTTCACTCAGTTATTAGTGCATCGGGTGCTCTTTAGACTGTTTCCCCCCTTGGAGTCCACATCCTCTCAGAAAATACCGTTGGAGAAACTGTCTTTTGAGAATTTGAAGTCTTACCTGGACAAGAATCCTGATTGTTCGAGATTGCGATCATCAATGGAAGGATATCTTGATGCCTATGATCCCACCACATCTGCCACTCCGGCTGGTGTTTTTGTCAATCGTGTTGAGGAAAGTGAATTTGAATGTGTTCCAACATGCCTCATGGATAACGTGATTTCTTTTCTGAATGATGTTAGGGAAGATCTTCGTGCTTCCATGGCGAAGGACATTGTTACCATTAAGAATGAAGGCTTCAAGATCGAAGAAGAGCCCAACCGTCGGTTGATGACTTCCACATCAGATGAAGACAGGCTTTCTGAACCATCTTCGTTGGACTTCCAGAAGAAGATCACTCTATCTAAACATGAGAAGCAAGATGCTGGTTCAAGTTCTGTGCTCCAAAACGGAGAAACATACAAGCGGCTCTTTGAAATGGAGAAAGAAGACGAGCTTGTGAGTCAGCTGTTACGATCTAGAAGCATGGAGGTGGAGAGGTTGAAATCTGGCCGACAGAGTTTGATCCTTGTGGCTTCATTGGTTGATCGTATTCCTAATCTTGCTGGATTAGCCCGGACATGCGAGATATTTAAAGCATCGGGTCTTGTCGTTGGAGATGCAAGCATAATACACGACAAACAGTTCCAACTAATCAGCGTGACTGCTGAGAAATGGGTTCCAATCGTTGAAGTCCCAGTGAACAGTTTAAAACTGTTCTTGGAGAAAAAGAAAAGAGAAGGCTTCTCAATCTTGGGACTGGAGCAGACAGCTAACAGTGTGTCTCTGGACAAGTATCAGTTCCCAAAGAAGACTGTTTTGGTGCTGGGTCGGGAAAAGGAAGGCATACCCGTGGATATAATCCATATACTGGACGCTTGTGTGGAGATCCCACAACTAGGAGTTGTTAGGTCCCTCAACGTCCACGTCAGCGGCGCCATTGCTCTCTGGGAATACACTCGCCAACAACGCATTCAATAG |
| Protein: MSSSLITSLSLSFKQVPPTAVPAFLDCVLSSTGVSPSSLFESLIKELPFHAEEKKFDSDDCNHIASLVAGLCHLLKSSGFGNEDNHNALQLFVWRVFIPLMKMVRAYDLDVLNKIIQSFFDVVVETSALDILRVSLVPFLLRSVGVSMGMLQHEESDFIRWGELLLGGSLDINDKDENYVGSLSESFPIPLSCHLLNLILNAAFRSRQEAPEAEDFAAGLLWDLCNTTERLLSQSVEHRSCAVSFLLPAVFKAFSAQSSLKISLKGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYSVLSLCLSSNGALSYVSEKDPVEFDFRSDQEFWEEIKKGLVFDESLVRKQSLHILKSVLSISEVSKTSTDKKAEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVLLYEMLDEYGTHLVEAVWSNQIDLLIKSSFRYEETPDEETEIFNWLEVLWNRGFRHDNPLVRCTVMESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKRIYTSRTIEGAAQYVCAYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMEHLENGFSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAASVVNPCEVPLGTLLQFVSAIPREFTDHNGSLRKTMLEWLQGCNRNTSDSLCTDGTRLVSSLHEYLKEFVSDHVEGFDDEDLEAWESQTKRWARVFFLTVNDEEHLADIIMFVQNSGVSFFQEKNHLERAPAKFLIFILSMLLELQNMQDGVSELSSSVKSKSCIGIVEETGKQIVGSASVINEKFAAVLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSITGKLGGPSQRRLSVPTTTAVLEAVTSVKIIGLISSYCGQVTSGVTELKLALTFFWKFVQHTLSSQNCNSEAEAEIYLAAFETLAAVLNAVVSLCSARAFNLLENDNTLLATVDGEYWLQASVPDFLHNINHLLTAGLLARSRRAVLLSWKWLCVESLLSVMNVLDARRIPGDRTSFFSDDTVKSIFYDIVESLENAGEGSALPMLKSVRLALGILASGKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHVAEDGDGPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKELKLLTLYGSVAFDEDFEAELSDNSDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLFQKLADLANMAEPACQNQDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMDNVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLVPILQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQLLVHRVLFRLFPPLESTSSQKIPLEKLSFENLKSYLDKNPDCSRLRSSMEGYLDAYDPTTSATPAGVFVNRVEESEFECVPTCLMDNVISFLNDVREDLRASMAKDIVTIKNEGFKIEEEPNRRLMTSTSDEDRLSEPSSLDFQKKITLSKHEKQDAGSSSVLQNGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLAGLARTCEIFKASGLVVGDASIIHDKQFQLISVTAEKWVPIVEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRIQ |